Validation Results for NCPIFHIRImplementationGuide

Generated Mon Jun 12 15:51:25 UTC 2023, FHIR version 4.0.1 for NCPI-FHIR-Implementation-Guide#0.2.0 (canonical = https://nih-ncpi.github.io/ncpi-fhir-ig (history)). See Errors Only

Quality Checks
Publisher Version:IG Publisher Version: v1.3.16
Publication Code:n/a . PackageId = NCPI-FHIR-Implementation-Guide, Canonical = https://nih-ncpi.github.io/ncpi-fhir-ig
Realm Check for n/a:
  • n/a
Publication Request:
  • This IG has never been published
  • This IG has never been published, so the version should start with '0.' or include a patch version e.g. '-ballot'
  • No publication request found
Supressed Messages:No Suppressed Issues
Dependency Checks:
PackageVersionFHIRCanonicalWeb BaseComment
.. NCPI-FHIR-Implementation-Guide0.2.0R4https://nih-ncpi.github.io/ncpi-fhir-ig
... hl7.terminology.r45.0.0 OR4http://terminology.hl7.orghttp://terminology.hl7.org/5.0.0Latest Release is 5.1.0
... hl7.fhir.uv.extensions.r41.0.0 MR4http://hl7.org/fhir/extensionshttp://hl7.org/fhir/extensions/1.0.0
... hl7.fhir.us.core3.1.1 OR4http://hl7.org/fhir/us/corehttp://hl7.org/fhir/us/core/STU3.1.1Latest Release is 6.0.0
Templates: fhir.base.template#current
Dependent IGs:no references
Global Profiles:(none declared)
HTA Analysis:Non-HL7 Igs are exempt from terminology dependency analysis
R5 Dependencies:(none)
Modifier Extensions:(none)
Previous Version Comparison: Unable to compare with previous version: Unable to find version history at https://nih-ncpi.github.io/ncpi-fhir-ig (Problem #1 with package-list.json at https://nih-ncpi.github.io/ncpi-fhir-ig: Invalid HTTP response 404 from https://nih-ncpi.github.io/ncpi-fhir-ig/package-list.json?nocache=1686584986579 (Not Found) (content in /tmp/http-log/fhir-http-2.log))
IPA Comparison: n/a
Summary: errors = 32, warn = 64, info = 31, broken links = 18
FilenameErrorsWarningsHints
Build Errors1840
/home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/ActivityDefinition-example-study-data-dictionary-table-1011
/home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/CodeSystem-ConditionInheritanceMode021
/home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/CodeSystem-example-study-data-dictionary-dataset-codesystem-1021
/home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/CodeSystem-example-study-data-dictionary-datatable-codesystem-1021
/home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/CodeSystem-hpo212
/home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/CodeSystem-loinc-answers200
/home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/CodeSystem-mondo200
/home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/CodeSystem-ncit200
/home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/CodeSystem-ncpi011
/home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/CodeSystem-ncpi-data-types011
/home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/CodeSystem-ncpi-study-type311
/home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/CodeSystem-nih-consent021
/home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/CodeSystem-omim200
/home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/CodeSystem-tbd-codes310
/home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/CodeSystem-v3-hgvs211
/home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/ConceptMap-example-study-data-dictionary-conceptmap-1070
/home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/Condition-disease-example-1010
/home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/Condition-phenotype-example-1000
/home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/Consent-ds-bav-consent110
/home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/Consent-gru-consent110
/home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/Consent-hmb-irb-npu-consent110
/home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/Consent-hmb-npu-consent110
/home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/DiagnosticReport-diagnostic-report-1000
/home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/DocumentReference-drs-document-reference-example-1000
/home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/DocumentReference-research-document-reference-example-1000
/home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/Encounter-example-encounter-study-01-patient-01000
/home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/Group-cmg-research-study-bhcmg-consent-group-hmb-npu000
/home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/Group-cmg-research-study-bhcmg-group000
/home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/Group-cmg-research-study-bhcmg-group-hmb-irb-npu000
/home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/Group-example-summary-group-1000
/home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/Group-ncpi-research-study-01-conset-group-01-main000
/home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/Group-ncpi-research-study-01-group-01-main000
/home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/ImplementationGuide-NCPI-FHIR-Implementation-Guide020
/home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/Observation-anvil-summary-cmg320
/home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/Observation-anvil-summary-phs000711370
/home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/Observation-diagnostic-implication-1001
/home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/Observation-example-observation-data-row-1001
/home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/Observation-example-study-summary-gender003
/home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/Observation-family-relationship-example-1000
/home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/Observation-family-relationship-example-2000
/home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/Observation-family-relationship-example-3000
/home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/Observation-family-relationship-example-4000
/home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/Observation-variant-example-1013
/home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/ObservationDefinition-example-study-data-dictionary-variable-1-1000
/home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/ObservationDefinition-example-study-data-dictionary-variable-1-2000
/home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/ObservationDefinition-example-study-data-dictionary-variable-1-3000
/home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/ObservationDefinition-example-study-data-dictionary-variable-1-4000
/home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/ObservationDefinition-example-study-data-dictionary-variable-1-5000
/home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/Organization-cmg-research-consortium000
/home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/Organization-ncpi-research-consortium-01000
/home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/Organization-organization-example-1000
/home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/Patient-ncpi-research-study-01-patient-01000
/home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/Patient-ncpi-research-study-01-patient-02000
/home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/Patient-patient-example-1000
/home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/Patient-patient-example-2000
/home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/Patient-patient-example-3000
/home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/Practitioner-practitioner-example-1000
/home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/PractitionerRole-practitioner-role-example-1000
/home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/Questionnaire-example-questionnaire-demographics-1100
/home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/QuestionnaireResponse-example-questionnaire-demographics-response-1012
/home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/ResearchStudy-cmg-research-study-bhcmg010
/home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/ResearchStudy-cmg-research-study-subject-cmg-hmb-irb-npu000
/home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/ResearchStudy-cmg-research-study-subject-cmg-hmb-npu000
/home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/ResearchStudy-ncpi-research-study-01010
/home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/ResearchStudy-ncpi-research-study-subject-01000
/home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/ResearchStudy-research-study-cmg010
/home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/ResearchStudy-research-study-example-1000
/home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/ResearchStudy-research-study-phs000711010
/home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/ResearchSubject-research-subject-example-1000
/home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/ResearchSubject-research-subject-example-2000
/home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/ResearchSubject-research-subject-example-3000
/home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/ResearchSubject-research-subject-study-01-patient-01000
/home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/ResearchSubject-research-subject-study-01-patient-02000
/home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/Specimen-ncpi-research-study-01-specimen-01010
/home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/Specimen-specimen-example-1000
/home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/StructureDefinition-disease000
/home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/StructureDefinition-family-relationship000
/home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/StructureDefinition-ncpi-drs-attachment000
/home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/StructureDefinition-ncpi-drs-document-reference000
/home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/StructureDefinition-ncpi-research-consortium000
/home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/StructureDefinition-ncpi-research-document-reference000
/home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/StructureDefinition-ncpi-research-study001
/home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/StructureDefinition-ncpi-specimen-task000
/home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/StructureDefinition-phenotype000
/home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/StructureDefinition-raw-data-observation010
/home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/StructureDefinition-research-consent-disease-abbreviation010
/home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/StructureDefinition-research-study-subject001
/home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/StructureDefinition-research-study-subject-consent010
/home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/StructureDefinition-study-data-dictionary-harmony000
/home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/StructureDefinition-study-data-dictionary-table000
/home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/StructureDefinition-study-data-dictionary-variable000
/home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/StructureDefinition-study-group000
/home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/StructureDefinition-study-summary013
/home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/StructureDefinition-study-variable-summary003
/home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/StructureDefinition-supporting-info010
/home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/Task-task-example-1000
/home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/Task-task-example-2000
/home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/ValueSet-condition-inheritance-vs010
/home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/ValueSet-datatable-mappings-valueset-1032
/home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/ValueSet-datatable-valueset-1010
/home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/ValueSet-disease-codes000
/home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/ValueSet-example-study-data-dictionary-case-control-vs-1030
/home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/ValueSet-loinc-answers000
/home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/ValueSet-ncpi-vs010
/home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/ValueSet-nih-consent-codes010
/home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/ValueSet-phenotype-codes000
/home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/ValueSet-tbd-codes200
/home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/input/resources/StructureDefinition-research-study-consent100

n/a Show Validation Information

output/Observation-example-observation-data-row-1.html#/html/body/div/div/div/div/div/div/p/a at Line 287, column 130errorThe link 'CodeSystem-example-study-dd-dataset-codesystem-1.html' for "demographics" cannot be resolved
output/Observation-example-observation-data-row-1.html#/html/body/div/div/div/div/div/div/p/a at Line 287, column 389errorThe link 'CodeSystem-example-study-dd-datatable-codesystem-1.html' for "CodeSystem" cannot be resolved
output/Observation-example-study-summary-gender.html#/html/body/div/div/div/div/div/div/p/a at Line 285, column 653errorThe link 'CodeSystem-example-study-dd-datatable-codesystem-1.html' for "demographics-table" cannot be resolved
output/Organization-ncpi-research-consortium-01.html#/html/body/div/div/div/div/div/div/p/a at Line 283, column 601errorThe link 'www.consortium-home.org' for "www.consortium-home.org" cannot be resolved
output/Questionnaire-example-questionnaire-demographics-1.html#/html/body/div/div/div/div/div/div/p/a at Line 310, column 98errorThe link 'CodeSystem-example-study-dd-dataset-codesystem-1.html' for "Demographics CodeSystem" cannot be resolved
output/ValueSet-datatable-mappings-valueset-1.html#/html/body/div/div/div/div/div/div/ul/li/table/tr/td/a at Line 321, column 1106errorThe link 'CodeSystem-hpo.html#hpo-HP.580010772' for "HP:0010772" cannot be resolved (valid targets: 1893 targets)
output/ValueSet-datatable-mappings-valueset-1.html#/html/body/div/div/div/div/div/div/ul/li/table/tr/td/a at Line 321, column 1466errorThe link 'CodeSystem-mondo.html#mondo-0017705' for "0017705" cannot be resolved (valid targets: [mondo-MONDO.580008542, segment-header, publish-box, bottom, segment-post-footer, codesystem-mondo-disease-ontology, mondo-MONDO.580005072, ig-status, mondo-MONDO.580002749, top, root, stripe, segment-footer, segment-navbar, segment-content, mondo-MONDO.580016033, segment-breadcrumb, mondo-MONDO.580016054])
output/ValueSet-datatable-mappings-valueset-1.html#/html/body/div/div/div/div/div/div/ul/li/table/tr/td/a at Line 321, column 1592errorThe link 'CodeSystem-mondo.html#mondo-0007130' for "0007130" cannot be resolved (valid targets: [mondo-MONDO.580008542, segment-header, publish-box, bottom, segment-post-footer, codesystem-mondo-disease-ontology, mondo-MONDO.580005072, ig-status, mondo-MONDO.580002749, top, root, stripe, segment-footer, segment-navbar, segment-content, mondo-MONDO.580016033, segment-breadcrumb, mondo-MONDO.580016054])
output/ValueSet-datatable-valueset-1.html#/html/body/div/div/div/div/div/div/table/tr/td/a at Line 325, column 3418errorThe link 'CodeSystem-hpo.html#hpo-HP.580010772' for "HP:0010772" cannot be resolved (valid targets: 1893 targets)
output/ValueSet-datatable-valueset-1.html#/html/body/div/div/div/div/div/div/table/tr/td/a at Line 325, column 3517errorThe link 'CodeSystem-mondo.html#mondo-MONDO.580017705' for "MONDO:0017705" cannot be resolved (valid targets: [mondo-MONDO.580008542, segment-header, publish-box, bottom, segment-post-footer, codesystem-mondo-disease-ontology, mondo-MONDO.580005072, ig-status, mondo-MONDO.580002749, top, root, stripe, segment-footer, segment-navbar, segment-content, mondo-MONDO.580016033, segment-breadcrumb, mondo-MONDO.580016054])
output/ValueSet-datatable-valueset-1.html#/html/body/div/div/div/div/div/div/table/tr/td/a at Line 325, column 3626errorThe link 'CodeSystem-mondo.html#mondo-MONDO.580007130' for "MONDO:0007130" cannot be resolved (valid targets: [mondo-MONDO.580008542, segment-header, publish-box, bottom, segment-post-footer, codesystem-mondo-disease-ontology, mondo-MONDO.580005072, ig-status, mondo-MONDO.580002749, top, root, stripe, segment-footer, segment-navbar, segment-content, mondo-MONDO.580016033, segment-breadcrumb, mondo-MONDO.580016054])
output/example_raw_data.html#/html/body/div/div/div/div/div/table/tbody/tr/td/a at Line 256, column 114errorThe link 'CodeSystem-example-study-dd-dataset-codesystem-1.html' for "dataset CodeSystem" cannot be resolved
output/example_raw_data.html#/html/body/div/div/div/div/div/p/a at Line 266, column 329errorThe link 'ObservationDefinition-example-study-dd-variable-1-1.json.html' for "subjectid" cannot be resolved
output/example_raw_data.html#/html/body/div/div/div/div/div/p/a at Line 266, column 475errorThe link 'ObservationDefinition-example-study-dd-variable-1-2.json.html' for "gender" cannot be resolved
output/example_raw_data.html#/html/body/div/div/div/div/div/p/a at Line 281, column 569errorThe link 'CodeSystem-example-study-dd-dataset-codesystem-1.html' for "demographics" cannot be resolved
output/example_raw_data.html#/html/body/div/div/div/div/div/p/a at Line 281, column 868errorThe link 'CodeSystem-example-study-dd-datatable-codesystem-1.html' for "CodeSystem" cannot be resolved
output/research_study.html#/html/body/div/div/div/div/div/p/a at Line 255, column 65errorThe link 'StructureDefinition-research-consortium.html' for "NCPI ResearchConsortium" cannot be resolved
output/research_study.html#/html/body/div/div/div/div/div/ul/li/p/a at Line 278, column 9errorThe link 'StructureDefinition-research-consortium.html' for "ResearchConsortium" cannot be resolved
1warningThe HTML fragment 'ip-statements.xhtml' is not included anywhere in the produced implementation guide
2warningAn HTML fragment from the set [cross-version-analysis.xhtml, cross-version-analysis-inline.xhtml] is not included anywhere in the produced implementation guide
3warningAn HTML fragment from the set [dependency-table.xhtml, dependency-table-short.xhtml] is not included anywhere in the produced implementation guide
4warningThe HTML fragment 'globals-table.xhtml' is not included anywhere in the produced implementation guide

fsh-generated/resources/ActivityDefinition-example-study-data-dictionary-table-1.json Show Validation Information (1)

PathSeverityMessage
ActivityDefinition.topic[0].coding[0] (l1/c725)informationCode System URI 'https://uts.nlm.nih.gov/uts/umls' is unknown so the code cannot be validated
ActivityDefinition.code.coding[0] (l1/c912)warningNo valid Display Names found for https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/example-study-data-dictionary-dataset-codesystem-1#demographics in the language Demographic data for 'https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/example-study-data-dictionary-dataset-codesystem-1#demographics'

fsh-generated/resources/CodeSystem-ConditionInheritanceMode.json Show Validation Information (1)

PathSeverityMessage
CodeSysteminformationCodeSystems SHOULD have a stated value for the caseSensitive element so that users know the status and meaning of the code system clearly
CodeSystem (l1/c6945)warningThe ShareableCodeSystem profile says that the experimental element is mandatory, but it is not present. Published code systems SHOULD conform to the ShareableCodeSystem profile
CodeSystem (l1/c6945)warningThe ShareableCodeSystem profile says that the caseSensitive element is mandatory, but it is not present. Published code systems SHOULD conform to the ShareableCodeSystem profile

fsh-generated/resources/CodeSystem-example-study-data-dictionary-dataset-codesystem-1.json Show Validation Information (1)

PathSeverityMessage
CodeSysteminformationCodeSystems SHOULD have a stated value for the caseSensitive element so that users know the status and meaning of the code system clearly
CodeSystem (l1/c1253)warningThe ShareableCodeSystem profile says that the experimental element is mandatory, but it is not present. Published code systems SHOULD conform to the ShareableCodeSystem profile
CodeSystem (l1/c1253)warningThe ShareableCodeSystem profile says that the caseSensitive element is mandatory, but it is not present. Published code systems SHOULD conform to the ShareableCodeSystem profile

fsh-generated/resources/CodeSystem-example-study-data-dictionary-datatable-codesystem-1.json Show Validation Information (1)

PathSeverityMessage
CodeSysteminformationCodeSystems SHOULD have a stated value for the caseSensitive element so that users know the status and meaning of the code system clearly
CodeSystem (l1/c2301)warningThe ShareableCodeSystem profile says that the experimental element is mandatory, but it is not present. Published code systems SHOULD conform to the ShareableCodeSystem profile
CodeSystem (l1/c2301)warningThe ShareableCodeSystem profile says that the caseSensitive element is mandatory, but it is not present. Published code systems SHOULD conform to the ShareableCodeSystem profile

fsh-generated/resources/CodeSystem-hpo.json Show Validation Information (1)

PathSeverityMessage
CodeSystem.where(url = 'http://purl.obolibrary.org/obo/hp.owl')errorConformance resource /home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/CodeSystem-hpo.json - the canonical URL (https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/hpo) does not match the URL (http://purl.obolibrary.org/obo/hp.owl)
CodeSysteminformationCodeSystems SHOULD have a stated value for the caseSensitive element so that users know the status and meaning of the code system clearly
CodeSysteminformationReview the All Codes Value Set - incomplete CodeSystems generally should not have an all codes value set specified
CodeSystem (l1/c337008)warningThe ShareableCodeSystem profile says that the caseSensitive element is mandatory, but it is not present. Published code systems SHOULD conform to the ShareableCodeSystem profile
fsh-generated/resources/CodeSystem-hpoerrorURL Mismatch https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/hpo vs http://purl.obolibrary.org/obo/hp.owl

fsh-generated/resources/CodeSystem-loinc-answers.json Show Validation Information (1)

PathSeverityMessage
CodeSystem.where(url = 'ncpi:loinc-answers')errorConformance resource /home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/CodeSystem-loinc-answers.json - the canonical URL (https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/loinc-answers) does not match the URL (ncpi:loinc-answers)
fsh-generated/resources/CodeSystem-loinc-answerserrorURL Mismatch https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/loinc-answers vs ncpi:loinc-answers

fsh-generated/resources/CodeSystem-mondo.json Show Validation Information (1)

PathSeverityMessage
CodeSystem.where(url = 'http://purl.obolibrary.org/obo/mondo.owl')errorConformance resource /home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/CodeSystem-mondo.json - the canonical URL (https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/mondo) does not match the URL (http://purl.obolibrary.org/obo/mondo.owl)
fsh-generated/resources/CodeSystem-mondoerrorURL Mismatch https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/mondo vs http://purl.obolibrary.org/obo/mondo.owl

fsh-generated/resources/CodeSystem-ncit.json Show Validation Information (1)

PathSeverityMessage
CodeSystem.where(url = 'http://purl.obolibrary.org/obo/ncit.owl')errorConformance resource /home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/CodeSystem-ncit.json - the canonical URL (https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/ncit) does not match the URL (http://purl.obolibrary.org/obo/ncit.owl)
fsh-generated/resources/CodeSystem-nciterrorURL Mismatch https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/ncit vs http://purl.obolibrary.org/obo/ncit.owl

fsh-generated/resources/CodeSystem-ncpi.json Show Validation Information (1)

PathSeverityMessage
CodeSysteminformationCodeSystems SHOULD have a stated value for the caseSensitive element so that users know the status and meaning of the code system clearly
CodeSystem (l1/c4544)warningThe ShareableCodeSystem profile says that the caseSensitive element is mandatory, but it is not present. Published code systems SHOULD conform to the ShareableCodeSystem profile

fsh-generated/resources/CodeSystem-ncpi-data-types.json Show Validation Information (1)

PathSeverityMessage
CodeSysteminformationCodeSystems SHOULD have a stated value for the caseSensitive element so that users know the status and meaning of the code system clearly
CodeSystem (l1/c1523)warningThe ShareableCodeSystem profile says that the caseSensitive element is mandatory, but it is not present. Published code systems SHOULD conform to the ShareableCodeSystem profile

fsh-generated/resources/CodeSystem-ncpi-study-type.json Show Validation Information (1)

PathSeverityMessage
CodeSystem.where(url = 'https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/ncpi-study-types')errorConformance resource /home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/CodeSystem-ncpi-study-type.json - the canonical URL (https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/ncpi-study-type) does not match the URL (https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/ncpi-study-types)
CodeSystem.urlerrorResource id/url mismatch: ncpi-study-type/https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/ncpi-study-types
CodeSysteminformationCodeSystems SHOULD have a stated value for the caseSensitive element so that users know the status and meaning of the code system clearly
CodeSystem (l1/c2947)warningThe ShareableCodeSystem profile says that the caseSensitive element is mandatory, but it is not present. Published code systems SHOULD conform to the ShareableCodeSystem profile
fsh-generated/resources/CodeSystem-ncpi-study-typeerrorURL Mismatch https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/ncpi-study-type vs https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/ncpi-study-types

fsh-generated/resources/CodeSystem-nih-consent.json Show Validation Information (1)

PathSeverityMessage
CodeSysteminformationCodeSystems SHOULD have a stated value for the caseSensitive element so that users know the status and meaning of the code system clearly
CodeSystem (l1/c2448)warningThe ShareableCodeSystem profile says that the experimental element is mandatory, but it is not present. Published code systems SHOULD conform to the ShareableCodeSystem profile
CodeSystem (l1/c2448)warningThe ShareableCodeSystem profile says that the caseSensitive element is mandatory, but it is not present. Published code systems SHOULD conform to the ShareableCodeSystem profile

fsh-generated/resources/CodeSystem-omim.json Show Validation Information (1)

PathSeverityMessage
CodeSystem.where(url = 'https://omim.org/')errorConformance resource /home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/CodeSystem-omim.json - the canonical URL (https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/omim) does not match the URL (https://omim.org/)
fsh-generated/resources/CodeSystem-omimerrorURL Mismatch https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/omim vs https://omim.org/

fsh-generated/resources/CodeSystem-tbd-codes.json Show Validation Information (1)

PathSeverityMessage
CodeSystem.where(url = 'http://hl7.org/fhir/uv/genomics-reporting/CodeSystem/tbd-codes')errorConformance resource /home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/CodeSystem-tbd-codes.json - the canonical URL (https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/tbd-codes) does not match the URL (http://hl7.org/fhir/uv/genomics-reporting/CodeSystem/tbd-codes)
CodeSystemwarningHL7 Defined CodeSystems SHOULD have a stated value for the caseSensitive element so that users know the status and meaning of the code system clearly
CodeSystem (l1/c8451)errorThe ShareableCodeSystem profile says that the caseSensitive element is mandatory, but it is not found. HL7 Published code systems SHALL conform to the ShareableCodeSystem profile
fsh-generated/resources/CodeSystem-tbd-codeserrorURL Mismatch https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/tbd-codes vs http://hl7.org/fhir/uv/genomics-reporting/CodeSystem/tbd-codes

fsh-generated/resources/CodeSystem-v3-hgvs.json Show Validation Information (1)

PathSeverityMessage
CodeSystem.where(url = 'http://varnomen.hgvs.org')errorConformance resource /home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/CodeSystem-v3-hgvs.json - the canonical URL (https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/v3-hgvs) does not match the URL (http://varnomen.hgvs.org)
CodeSysteminformationCodeSystems SHOULD have a stated value for the caseSensitive element so that users know the status and meaning of the code system clearly
CodeSystem (l1/c11769)warningThe ShareableCodeSystem profile says that the caseSensitive element is mandatory, but it is not present. Published code systems SHOULD conform to the ShareableCodeSystem profile
fsh-generated/resources/CodeSystem-v3-hgvserrorURL Mismatch https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/v3-hgvs vs http://varnomen.hgvs.org

fsh-generated/resources/ConceptMap-example-study-data-dictionary-conceptmap-1.json Show Validation Information (1)

PathSeverityMessage
ConceptMap.group[0].target (l1/c6791)warningUnknown Target Code System https://uts.nlm.nih.gov/uts/umls, so the target codes cannot be checked
ConceptMap.group[2].target (l1/c7450)warningTarget Code System http://purl.obolibrary.org/obo/hp.owl doesn't have all content (content = fragment), so the target codes cannot be checked
ConceptMap.group[3].target (l1/c7927)warningTarget Code System http://purl.obolibrary.org/obo/mondo.owl doesn't have all content (content = fragment), so the target codes cannot be checked
ConceptMap (l1/c7929)warningThe ShareableConceptMap profile says that the title element is mandatory, but it is not present. Published concept maps SHOULD conform to the ShareableConceptMap profile
ConceptMap (l1/c7929)warningThe ShareableConceptMap profile recommends that the name element is populated, but it is not present. Published concept maps SHOULD conform to the ShareableConceptMap profile
ConceptMap (l1/c7929)warningThe ShareableConceptMap profile says that the experimental element is mandatory, but it is not present. Published concept maps SHOULD conform to the ShareableConceptMap profile
ConceptMap (l1/c7929)warningThe ShareableConceptMap profile says that the description element is mandatory, but it is not present. Published concept maps SHOULD conform to the ShareableConceptMap profile

fsh-generated/resources/Condition-disease-example-1.json Show Validation Information (1)

PathSeverityMessage
Condition.code.coding[0] (l42/c8)warningUnknown Code 'NCIT:Neuroblastoma' in the system 'http://purl.obolibrary.org/obo/ncit.owl' - note that the code system is labeled as a fragment, so the code may be valid in some other fragment for 'http://purl.obolibrary.org/obo/ncit.owl#NCIT:Neuroblastoma'

fsh-generated/resources/Condition-phenotype-example-1.json Show Validation Information (1)


fsh-generated/resources/Consent-ds-bav-consent.json Show Validation Information (1)

PathSeverityMessage
Consent (l1/c2)errorRule ppc-1: 'Either a Policy or PolicyRule' Failed
Consent.scope.coding[0] (l18/c8)warningA code with no system has no defined meaning. A system should be provided

fsh-generated/resources/Consent-gru-consent.json Show Validation Information (1)

PathSeverityMessage
Consent (l1/c2)errorRule ppc-1: 'Either a Policy or PolicyRule' Failed
Consent.scope.coding[0] (l12/c8)warningA code with no system has no defined meaning. A system should be provided

fsh-generated/resources/Consent-hmb-irb-npu-consent.json Show Validation Information (1)

PathSeverityMessage
Consent (l1/c2)errorRule ppc-1: 'Either a Policy or PolicyRule' Failed
Consent.scope.coding[0] (l12/c8)warningA code with no system has no defined meaning. A system should be provided

fsh-generated/resources/Consent-hmb-npu-consent.json Show Validation Information (1)

PathSeverityMessage
Consent (l1/c2)errorRule ppc-1: 'Either a Policy or PolicyRule' Failed
Consent.scope.coding[0] (l12/c8)warningA code with no system has no defined meaning. A system should be provided

fsh-generated/resources/DiagnosticReport-diagnostic-report-1.json Show Validation Information (1)


fsh-generated/resources/DocumentReference-drs-document-reference-example-1.json Show Validation Information (1)


fsh-generated/resources/DocumentReference-research-document-reference-example-1.json Show Validation Information (1)


fsh-generated/resources/Encounter-example-encounter-study-01-patient-01.json Show Validation Information (1)


fsh-generated/resources/Group-cmg-research-study-bhcmg-consent-group-hmb-npu.json Show Validation Information (1)


fsh-generated/resources/Group-cmg-research-study-bhcmg-group.json Show Validation Information (1)


fsh-generated/resources/Group-cmg-research-study-bhcmg-group-hmb-irb-npu.json Show Validation Information (1)


fsh-generated/resources/Group-example-summary-group-1.json Show Validation Information (1)


fsh-generated/resources/Group-ncpi-research-study-01-conset-group-01-main.json Show Validation Information (1)


fsh-generated/resources/Group-ncpi-research-study-01-group-01-main.json Show Validation Information (1)


fsh-generated/resources/ImplementationGuide-NCPI-FHIR-Implementation-Guide.json Show Validation Information (0)

PathSeverityMessage
ImplementationGuide.definition.resource[54].description (l1/c32953)warningvalue should not start or finish with whitespace 'Grouping subject participation within a research study is helpful to provide definitive lists of participants that fit a specific criteria such as *All Participants* or *Participants From a Particular Consent Group*, etc. '
ImplementationGuide.definition.resource[81].description (l1/c42464)warningvalue should not start or finish with whitespace 'A FHIR Document Reference created by an analysis task. Context.related = Task '

fsh-generated/resources/Observation-anvil-summary-cmg.json Show Validation Information (1)

PathSeverityMessage
Observation.code.coding[0] (l7/c8)errorWrong Display Name 'Variable Summary' for https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/ncpi#Summary - should be 'Summary Data' (for the language(s) 'en') for 'https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/ncpi#Summary'
Observation.component[0].code.coding[0] (l23/c12)warningA code with no system has no defined meaning. A system should be provided
Observation.component[1].code.coding[0] (l34/c12)errorWrong Display Name 'Number of Samples' for https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/ncpi#SampleCount - should be 'Number of samples that are part of this study' (for the language(s) 'en') for 'https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/ncpi#SampleCount'
Observation.component[2].code.coding[0] (l46/c12)errorWrong Display Name 'Number of Participants' for https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/ncpi#Participant - should be 'Number of participants that are part of this study' (for the language(s) 'en') for 'https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/ncpi#Participant'
Observation.component[3].code.coding[0] (l58/c12)warningA code with no system has no defined meaning. A system should be provided

fsh-generated/resources/Observation-anvil-summary-phs000711.json Show Validation Information (1)

PathSeverityMessage
Observation.code.coding[0] (l7/c8)errorWrong Display Name 'Variable Summary' for https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/ncpi#Summary - should be 'Summary Data' (for the language(s) 'en') for 'https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/ncpi#Summary'
Observation.component[0].code.coding[0] (l23/c12)errorWrong Display Name 'Number of Samples' for https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/ncpi#SampleCount - should be 'Number of samples that are part of this study' (for the language(s) 'en') for 'https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/ncpi#SampleCount'
Observation.component[1].code.coding[0] (l35/c12)errorWrong Display Name 'Number of Participants' for https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/ncpi#Participant - should be 'Number of participants that are part of this study' (for the language(s) 'en') for 'https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/ncpi#Participant'
Observation.component[2].code.coding[0] (l47/c12)warningA code with no system has no defined meaning. A system should be provided
Observation.component[3].code.coding[0] (l58/c12)warningA code with no system has no defined meaning. A system should be provided
Observation.component[4].code.coding[0] (l69/c12)warningA code with no system has no defined meaning. A system should be provided
Observation.component[5].code.coding[0] (l80/c12)warningA code with no system has no defined meaning. A system should be provided
Observation.component[6].code.coding[0] (l91/c12)warningA code with no system has no defined meaning. A system should be provided
Observation.component[7].code.coding[0] (l101/c12)warningA code with no system has no defined meaning. A system should be provided
Observation.component[8].code.coding[0] (l111/c12)warningA code with no system has no defined meaning. A system should be provided

fsh-generated/resources/Observation-diagnostic-implication-1.json Show Validation Information (1)

PathSeverityMessage
Observation.component[0].value.ofType(CodeableConcept).coding[0] (l42/c12)informationCode System URI 'http://fhir.ncpi-project-forge.io/ValueSet/condition-inheritance-vs' is unknown so the code cannot be validated

fsh-generated/resources/Observation-example-observation-data-row-1.json Show Validation Information (1)

PathSeverityMessage
Observation.component[3].value.ofType(CodeableConcept).coding[0] (l77/c12)informationCode System URI 'https://uts.nlm.nih.gov/uts/umls' is unknown so the code cannot be validated

fsh-generated/resources/Observation-example-study-summary-gender.json Show Validation Information (1)

PathSeverityMessage
Observation.code.coding[0] (l11/c8)informationCode System URI 'https://uts.nlm.nih.gov/uts/umls' is unknown so the code cannot be validated
Observation.value.ofType(CodeableConcept).coding[0] (l21/c8)informationCode System URI 'https://uts.nlm.nih.gov/uts/umls' is unknown so the code cannot be validated
Observation.component[2].code.coding[0] (l66/c12)informationCode System URI 'https://uts.nlm.nih.gov/uts/umls' is unknown so the code cannot be validated

fsh-generated/resources/Observation-family-relationship-example-1.json Show Validation Information (1)


fsh-generated/resources/Observation-family-relationship-example-2.json Show Validation Information (1)


fsh-generated/resources/Observation-family-relationship-example-3.json Show Validation Information (1)


fsh-generated/resources/Observation-family-relationship-example-4.json Show Validation Information (1)


fsh-generated/resources/Observation-variant-example-1.json Show Validation Information (1)

PathSeverityMessage
Observation.component[0].value.ofType(CodeableConcept).coding[0] (l59/c12)informationCode System URI 'https://www.ncbi.nlm.nih.gov/gene' is unknown so the code cannot be validated
Observation.component[1].value.ofType(CodeableConcept).coding[0] (l79/c12)informationCode System URI 'http://fhir.ncpi-project-forge.io/ValueSet/loinc-answers' is unknown so the code cannot be validated
Observation.component[7].value.ofType(CodeableConcept).coding[0] (l182/c12)informationCode System URI 'http://www.ncbi.nlm.nih.gov/refseq' is unknown so the code cannot be validated
Observation.component[8].value.ofType(CodeableConcept).coding[0] (l202/c12)warningError from server: Error parsing HGVS response: Error parsing JSON source: Unexpected char "<" in json stream at Line 0 (path=[]) (see Tx log)

fsh-generated/resources/ObservationDefinition-example-study-data-dictionary-variable-1-1.json Show Validation Information (1)


fsh-generated/resources/ObservationDefinition-example-study-data-dictionary-variable-1-2.json Show Validation Information (1)


fsh-generated/resources/ObservationDefinition-example-study-data-dictionary-variable-1-3.json Show Validation Information (1)


fsh-generated/resources/ObservationDefinition-example-study-data-dictionary-variable-1-4.json Show Validation Information (1)


fsh-generated/resources/ObservationDefinition-example-study-data-dictionary-variable-1-5.json Show Validation Information (1)


fsh-generated/resources/Organization-cmg-research-consortium.json Show Validation Information (1)


fsh-generated/resources/Organization-ncpi-research-consortium-01.json Show Validation Information (1)


fsh-generated/resources/Organization-organization-example-1.json Show Validation Information (1)


fsh-generated/resources/Patient-ncpi-research-study-01-patient-01.json Show Validation Information (1)


fsh-generated/resources/Patient-ncpi-research-study-01-patient-02.json Show Validation Information (1)


fsh-generated/resources/Patient-patient-example-1.json Show Validation Information (1)


fsh-generated/resources/Patient-patient-example-2.json Show Validation Information (1)


fsh-generated/resources/Patient-patient-example-3.json Show Validation Information (1)


fsh-generated/resources/Practitioner-practitioner-example-1.json Show Validation Information (1)


fsh-generated/resources/PractitionerRole-practitioner-role-example-1.json Show Validation Information (1)


fsh-generated/resources/Questionnaire-example-questionnaire-demographics-1.json Show Validation Information (1)

PathSeverityMessage
Questionnaire.urlerrorResource id/url mismatch: example-questionnaire-demographics-1/https://nih-ncpi.github.io/ncpi-fhir-ig/data-dictionary/study-name/demographics

fsh-generated/resources/QuestionnaireResponse-example-questionnaire-demographics-response-1.json Show Validation Information (1)

PathSeverityMessage
QuestionnaireResponse.item[3].answer[0].value.ofType(Coding) (l47/c12)informationCode System URI 'https://uts.nlm.nih.gov/uts/umls' is unknown so the code cannot be validated
QuestionnaireResponse.item[1].answer[0] (l24/c34)informationCannot validate string answer option because no option list is provided
QuestionnaireResponse.item[3].answer[0] (l47/c12)warningThe code provided C99269 cannot be validated in the options value set (Case/Control Vars for 'status' categoricals) in the questionnaire because the system https://uts.nlm.nih.gov/uts/umls is unknown

fsh-generated/resources/ResearchStudy-cmg-research-study-bhcmg.json Show Validation Information (1)

PathSeverityMessage
ResearchStudy.focus[1].coding[0] (l57/c10)warningUnknown Code 'HP:0030853' in the system 'http://purl.obolibrary.org/obo/hp.owl' - note that the code system is labeled as a fragment, so the code may be valid in some other fragment for 'http://purl.obolibrary.org/obo/hp.owl#HP:0030853'

fsh-generated/resources/ResearchStudy-cmg-research-study-subject-cmg-hmb-irb-npu.json Show Validation Information (1)


fsh-generated/resources/ResearchStudy-cmg-research-study-subject-cmg-hmb-npu.json Show Validation Information (1)


fsh-generated/resources/ResearchStudy-ncpi-research-study-01.json Show Validation Information (1)

PathSeverityMessage
ResearchStudy.primaryPurposeType.coding[0] (l24/c8)warningA code with no system has no defined meaning. A system should be provided

fsh-generated/resources/ResearchStudy-ncpi-research-study-subject-01.json Show Validation Information (1)


fsh-generated/resources/ResearchStudy-research-study-cmg.json Show Validation Information (1)

PathSeverityMessage
ResearchStudy.primaryPurposeType.coding[0] (l8/c8)warningA code with no system has no defined meaning. A system should be provided

fsh-generated/resources/ResearchStudy-research-study-example-1.json Show Validation Information (1)


fsh-generated/resources/ResearchStudy-research-study-phs000711.json Show Validation Information (1)

PathSeverityMessage
ResearchStudy.primaryPurposeType.coding[0] (l8/c8)warningA code with no system has no defined meaning. A system should be provided

fsh-generated/resources/ResearchSubject-research-subject-example-1.json Show Validation Information (1)


fsh-generated/resources/ResearchSubject-research-subject-example-2.json Show Validation Information (1)


fsh-generated/resources/ResearchSubject-research-subject-example-3.json Show Validation Information (1)


fsh-generated/resources/ResearchSubject-research-subject-study-01-patient-01.json Show Validation Information (1)


fsh-generated/resources/ResearchSubject-research-subject-study-01-patient-02.json Show Validation Information (1)


fsh-generated/resources/Specimen-ncpi-research-study-01-specimen-01.json Show Validation Information (1)

PathSeverityMessage
Specimen.type.coding[0] (l7/c8)warningUnknown Code 'C17610' in the system 'http://purl.obolibrary.org/obo/ncit.owl' - note that the code system is labeled as a fragment, so the code may be valid in some other fragment for 'http://purl.obolibrary.org/obo/ncit.owl#C17610'

fsh-generated/resources/Specimen-specimen-example-1.json Show Validation Information (1)


fsh-generated/resources/StructureDefinition-disease.json Show Validation Information (1)


fsh-generated/resources/StructureDefinition-family-relationship.json Show Validation Information (1)


fsh-generated/resources/StructureDefinition-ncpi-drs-attachment.json Show Validation Information (1)


fsh-generated/resources/StructureDefinition-ncpi-drs-document-reference.json Show Validation Information (1)


fsh-generated/resources/StructureDefinition-ncpi-research-consortium.json Show Validation Information (1)


fsh-generated/resources/StructureDefinition-ncpi-research-document-reference.json Show Validation Information (1)


fsh-generated/resources/StructureDefinition-ncpi-research-study.json Show Validation Information (1)

PathSeverityMessage
StructureDefinition.snapshot.element[19].pattern.ofType(Coding)informationThe repeating element has a pattern. The pattern will apply to all the repeats (this has not been clear to all users)

fsh-generated/resources/StructureDefinition-ncpi-specimen-task.json Show Validation Information (1)


fsh-generated/resources/StructureDefinition-phenotype.json Show Validation Information (1)


fsh-generated/resources/StructureDefinition-raw-data-observation.json Show Validation Information (1)

PathSeverityMessage
StructureDefinition.where(url = 'https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/raw-data-observation')warningThe Implementation Guide contains no examples for this profile

fsh-generated/resources/StructureDefinition-research-consent-disease-abbreviation.json Show Validation Information (1)

PathSeverityMessage
StructureDefinition.context[0]warningReview the extension type: extensions should not have a context of Element unless it's really intended that they can be used anywhere

fsh-generated/resources/StructureDefinition-research-study-subject.json Show Validation Information (1)

PathSeverityMessage
StructureDefinition.snapshot.element[20].pattern.ofType(Coding)informationThe repeating element has a pattern. The pattern will apply to all the repeats (this has not been clear to all users)

fsh-generated/resources/StructureDefinition-research-study-subject-consent.json Show Validation Information (1)

PathSeverityMessage
StructureDefinition.context[0]warningReview the extension type: extensions should not have a context of Element unless it's really intended that they can be used anywhere

fsh-generated/resources/StructureDefinition-study-data-dictionary-harmony.json Show Validation Information (1)


fsh-generated/resources/StructureDefinition-study-data-dictionary-table.json Show Validation Information (1)


fsh-generated/resources/StructureDefinition-study-data-dictionary-variable.json Show Validation Information (1)


fsh-generated/resources/StructureDefinition-study-group.json Show Validation Information (1)


fsh-generated/resources/StructureDefinition-study-summary.json Show Validation Information (1)

PathSeverityMessage
StructureDefinition.snapshot.element[17].pattern.ofType(Coding) (l1/c48506)informationCode System URI 'https://uts.nlm.nih.gov/uts/umls' is unknown so the code cannot be validated
StructureDefinition.differential.element[1].pattern.ofType(Coding) (l1/c103432)informationCode System URI 'https://uts.nlm.nih.gov/uts/umls' is unknown so the code cannot be validated
StructureDefinition.snapshot.element[17].pattern.ofType(Coding)informationThe repeating element has a pattern. The pattern will apply to all the repeats (this has not been clear to all users)
StructureDefinition.where(url = 'https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/study-summary')warningThe Implementation Guide contains no examples for this profile

fsh-generated/resources/StructureDefinition-study-variable-summary.json Show Validation Information (1)

PathSeverityMessage
StructureDefinition.snapshot.element[17].pattern.ofType(Coding) (l1/c52328)informationCode System URI 'https://uts.nlm.nih.gov/uts/umls' is unknown so the code cannot be validated
StructureDefinition.differential.element[1].pattern.ofType(Coding) (l1/c108750)informationCode System URI 'https://uts.nlm.nih.gov/uts/umls' is unknown so the code cannot be validated
StructureDefinition.snapshot.element[17].pattern.ofType(Coding)informationThe repeating element has a pattern. The pattern will apply to all the repeats (this has not been clear to all users)

fsh-generated/resources/StructureDefinition-supporting-info.json Show Validation Information (1)

PathSeverityMessage
StructureDefinition.context[0]warningReview the extension type: extensions should not have a context of Element unless it's really intended that they can be used anywhere

fsh-generated/resources/Task-task-example-1.json Show Validation Information (1)


fsh-generated/resources/Task-task-example-2.json Show Validation Information (1)


fsh-generated/resources/ValueSet-condition-inheritance-vs.json Show Validation Information (1)

PathSeverityMessage
ValueSet (l1/c1128)warningThe ShareableValueSet profile says that the experimental element is mandatory, but it is not present. Published value sets SHOULD conform to the ShareableValueSet profile

fsh-generated/resources/ValueSet-datatable-mappings-valueset-1.json Show Validation Information (1)

PathSeverityMessage
ValueSet.compose[0].include[0]warningUnknown System 'https://uts.nlm.nih.gov/uts/umls' specified, so Concepts and Filters can't be checked (Details: Code System URI 'https://uts.nlm.nih.gov/uts/umls' is unknown so the code cannot be validated)
ValueSet.compose[0].include[2].concept[0]informationUnknown Code 'HP:0010772' in the system 'http://purl.obolibrary.org/obo/hp.owl' - note that the code system is labeled as a fragment, so the code may be valid in some other fragment
ValueSet.compose[0].include[3].concept[0]informationUnknown Code '0017705' in the system 'http://purl.obolibrary.org/obo/mondo.owl' - note that the code system is labeled as a fragment, so the code may be valid in some other fragment
ValueSet (l1/c3364)warningThe ShareableValueSet profile says that the experimental element is mandatory, but it is not present. Published value sets SHOULD conform to the ShareableValueSet profile
ValueSet.where(id = 'datatable-mappings-valueset-1')warningError from server: Unable to provide support for code system https://uts.nlm.nih.gov/uts/umls (see Tx log)

fsh-generated/resources/ValueSet-datatable-valueset-1.json Show Validation Information (1)

PathSeverityMessage
ValueSet (l1/c1040)warningThe ShareableValueSet profile says that the experimental element is mandatory, but it is not present. Published value sets SHOULD conform to the ShareableValueSet profile

fsh-generated/resources/ValueSet-disease-codes.json Show Validation Information (1)


fsh-generated/resources/ValueSet-example-study-data-dictionary-case-control-vs-1.json Show Validation Information (1)

PathSeverityMessage
ValueSet.compose[0].include[0]warningUnknown System 'https://uts.nlm.nih.gov/uts/umls' specified, so Concepts and Filters can't be checked (Details: The CodeSystem https://uts.nlm.nih.gov/uts/umls is unknown (from Tx-Server))
ValueSet (l1/c1237)warningThe ShareableValueSet profile says that the experimental element is mandatory, but it is not present. Published value sets SHOULD conform to the ShareableValueSet profile
ValueSet.where(id = 'example-study-data-dictionary-case-control-vs-1')warningError from server: Unable to provide support for code system https://uts.nlm.nih.gov/uts/umls (see Tx log)

fsh-generated/resources/ValueSet-loinc-answers.json Show Validation Information (1)


fsh-generated/resources/ValueSet-ncpi-vs.json Show Validation Information (1)

PathSeverityMessage
ValueSet (l1/c1173)warningThe ShareableValueSet profile says that the experimental element is mandatory, but it is not present. Published value sets SHOULD conform to the ShareableValueSet profile

fsh-generated/resources/ValueSet-nih-consent-codes.json Show Validation Information (1)

PathSeverityMessage
ValueSet (l1/c953)warningThe ShareableValueSet profile says that the experimental element is mandatory, but it is not present. Published value sets SHOULD conform to the ShareableValueSet profile

fsh-generated/resources/ValueSet-phenotype-codes.json Show Validation Information (1)


fsh-generated/resources/ValueSet-tbd-codes.json Show Validation Information (1)

PathSeverityMessage
ValueSet.where(url = 'http://hl7.org/fhir/uv/genomics-reporting/ValueSet/tbd-codes')errorConformance resource /home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/ValueSet-tbd-codes.json - the canonical URL (https://nih-ncpi.github.io/ncpi-fhir-ig/ValueSet/tbd-codes) does not match the URL (http://hl7.org/fhir/uv/genomics-reporting/ValueSet/tbd-codes)
fsh-generated/resources/ValueSet-tbd-codeserrorURL Mismatch https://nih-ncpi.github.io/ncpi-fhir-ig/ValueSet/tbd-codes vs http://hl7.org/fhir/uv/genomics-reporting/ValueSet/tbd-codes

input/resources/StructureDefinition-research-study-consent.json Show Validation Information (1)

PathSeverityMessage
StructureDefinition.snapshot.element[10].example[0].value.ofType(Identifier) (l1/c31031)errorif identifier.system is 'urn:ietf:rfc:3986', then the identifier.value must be a full URI (e.g. start with a scheme), not 'Local eCMS identifier'

Suppressed Messages (Warnings, hints, broken links)

No suppressed messsages

Errors sorted by type


CODESYSTEM_SHAREABLE_MISSING

fsh-generated/resources/CodeSystem-ConditionInheritanceMode.jsonThe ShareableCodeSystem profile says that the experimental element is mandatory, but it is not present. Published code systems SHOULD conform to the ShareableCodeSystem profile
fsh-generated/resources/CodeSystem-ConditionInheritanceMode.jsonThe ShareableCodeSystem profile says that the caseSensitive element is mandatory, but it is not present. Published code systems SHOULD conform to the ShareableCodeSystem profile
fsh-generated/resources/CodeSystem-example-study-data-dictionary-dataset-codesystem-1.jsonThe ShareableCodeSystem profile says that the experimental element is mandatory, but it is not present. Published code systems SHOULD conform to the ShareableCodeSystem profile
fsh-generated/resources/CodeSystem-example-study-data-dictionary-dataset-codesystem-1.jsonThe ShareableCodeSystem profile says that the caseSensitive element is mandatory, but it is not present. Published code systems SHOULD conform to the ShareableCodeSystem profile
fsh-generated/resources/CodeSystem-example-study-data-dictionary-datatable-codesystem-1.jsonThe ShareableCodeSystem profile says that the experimental element is mandatory, but it is not present. Published code systems SHOULD conform to the ShareableCodeSystem profile
fsh-generated/resources/CodeSystem-example-study-data-dictionary-datatable-codesystem-1.jsonThe ShareableCodeSystem profile says that the caseSensitive element is mandatory, but it is not present. Published code systems SHOULD conform to the ShareableCodeSystem profile
fsh-generated/resources/CodeSystem-hpo.jsonThe ShareableCodeSystem profile says that the caseSensitive element is mandatory, but it is not present. Published code systems SHOULD conform to the ShareableCodeSystem profile
fsh-generated/resources/CodeSystem-ncpi.jsonThe ShareableCodeSystem profile says that the caseSensitive element is mandatory, but it is not present. Published code systems SHOULD conform to the ShareableCodeSystem profile
fsh-generated/resources/CodeSystem-ncpi-data-types.jsonThe ShareableCodeSystem profile says that the caseSensitive element is mandatory, but it is not present. Published code systems SHOULD conform to the ShareableCodeSystem profile
fsh-generated/resources/CodeSystem-ncpi-study-type.jsonThe ShareableCodeSystem profile says that the caseSensitive element is mandatory, but it is not present. Published code systems SHOULD conform to the ShareableCodeSystem profile
fsh-generated/resources/CodeSystem-nih-consent.jsonThe ShareableCodeSystem profile says that the experimental element is mandatory, but it is not present. Published code systems SHOULD conform to the ShareableCodeSystem profile
fsh-generated/resources/CodeSystem-nih-consent.jsonThe ShareableCodeSystem profile says that the caseSensitive element is mandatory, but it is not present. Published code systems SHOULD conform to the ShareableCodeSystem profile
fsh-generated/resources/CodeSystem-v3-hgvs.jsonThe ShareableCodeSystem profile says that the caseSensitive element is mandatory, but it is not present. Published code systems SHOULD conform to the ShareableCodeSystem profile

CODESYSTEM_SHAREABLE_MISSING_HL7

fsh-generated/resources/CodeSystem-tbd-codes.jsonThe ShareableCodeSystem profile says that the caseSensitive element is mandatory, but it is not found. HL7 Published code systems SHALL conform to the ShareableCodeSystem profile

CONCEPTMAP_GROUP_TARGET_INCOMPLETE

fsh-generated/resources/ConceptMap-example-study-data-dictionary-conceptmap-1.jsonTarget Code System http://purl.obolibrary.org/obo/hp.owl doesn't have all content (content = fragment), so the target codes cannot be checked
fsh-generated/resources/ConceptMap-example-study-data-dictionary-conceptmap-1.jsonTarget Code System http://purl.obolibrary.org/obo/mondo.owl doesn't have all content (content = fragment), so the target codes cannot be checked

CONCEPTMAP_GROUP_TARGET_UNKNOWN

fsh-generated/resources/ConceptMap-example-study-data-dictionary-conceptmap-1.jsonUnknown Target Code System https://uts.nlm.nih.gov/uts/umls, so the target codes cannot be checked

CONCEPTMAP_SHAREABLE_EXTRA_MISSING

fsh-generated/resources/ConceptMap-example-study-data-dictionary-conceptmap-1.jsonThe ShareableConceptMap profile recommends that the name element is populated, but it is not present. Published concept maps SHOULD conform to the ShareableConceptMap profile

CONCEPTMAP_SHAREABLE_MISSING

fsh-generated/resources/ConceptMap-example-study-data-dictionary-conceptmap-1.jsonThe ShareableConceptMap profile says that the title element is mandatory, but it is not present. Published concept maps SHOULD conform to the ShareableConceptMap profile
fsh-generated/resources/ConceptMap-example-study-data-dictionary-conceptmap-1.jsonThe ShareableConceptMap profile says that the experimental element is mandatory, but it is not present. Published concept maps SHOULD conform to the ShareableConceptMap profile
fsh-generated/resources/ConceptMap-example-study-data-dictionary-conceptmap-1.jsonThe ShareableConceptMap profile says that the description element is mandatory, but it is not present. Published concept maps SHOULD conform to the ShareableConceptMap profile

QUESTIONNAIRE_QR_ITEM_BADOPTION_CS

fsh-generated/resources/QuestionnaireResponse-example-questionnaire-demographics-response-1.jsonThe code provided C99269 cannot be validated in the options value set (Case/Control Vars for 'status' categoricals) in the questionnaire because the system https://uts.nlm.nih.gov/uts/umls is unknown

Questionnaire_QR_Item_StringNoOptions

fsh-generated/resources/QuestionnaireResponse-example-questionnaire-demographics-response-1.jsonCannot validate string answer option because no option list is provided

RESOURCE_CANONICAL_MISMATCH

fsh-generated/resources/CodeSystem-hpo.jsonConformance resource /home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/CodeSystem-hpo.json - the canonical URL (https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/hpo) does not match the URL (http://purl.obolibrary.org/obo/hp.owl)
fsh-generated/resources/CodeSystem-loinc-answers.jsonConformance resource /home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/CodeSystem-loinc-answers.json - the canonical URL (https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/loinc-answers) does not match the URL (ncpi:loinc-answers)
fsh-generated/resources/CodeSystem-mondo.jsonConformance resource /home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/CodeSystem-mondo.json - the canonical URL (https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/mondo) does not match the URL (http://purl.obolibrary.org/obo/mondo.owl)
fsh-generated/resources/CodeSystem-ncit.jsonConformance resource /home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/CodeSystem-ncit.json - the canonical URL (https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/ncit) does not match the URL (http://purl.obolibrary.org/obo/ncit.owl)
fsh-generated/resources/CodeSystem-ncpi-study-type.jsonConformance resource /home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/CodeSystem-ncpi-study-type.json - the canonical URL (https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/ncpi-study-type) does not match the URL (https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/ncpi-study-types)
fsh-generated/resources/CodeSystem-omim.jsonConformance resource /home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/CodeSystem-omim.json - the canonical URL (https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/omim) does not match the URL (https://omim.org/)
fsh-generated/resources/CodeSystem-tbd-codes.jsonConformance resource /home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/CodeSystem-tbd-codes.json - the canonical URL (https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/tbd-codes) does not match the URL (http://hl7.org/fhir/uv/genomics-reporting/CodeSystem/tbd-codes)
fsh-generated/resources/CodeSystem-v3-hgvs.jsonConformance resource /home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/CodeSystem-v3-hgvs.json - the canonical URL (https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/v3-hgvs) does not match the URL (http://varnomen.hgvs.org)
fsh-generated/resources/ValueSet-tbd-codes.jsonConformance resource /home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/ValueSet-tbd-codes.json - the canonical URL (https://nih-ncpi.github.io/ncpi-fhir-ig/ValueSet/tbd-codes) does not match the URL (http://hl7.org/fhir/uv/genomics-reporting/ValueSet/tbd-codes)

RESOURCE_ID_MISMATCH

fsh-generated/resources/CodeSystem-ncpi-study-type.jsonResource id/url mismatch: ncpi-study-type/https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/ncpi-study-types
fsh-generated/resources/Questionnaire-example-questionnaire-demographics-1.jsonResource id/url mismatch: example-questionnaire-demographics-1/https://nih-ncpi.github.io/ncpi-fhir-ig/data-dictionary/study-name/demographics

TERMINOLOGY_TX_SYSTEM_NO_CODE

fsh-generated/resources/Consent-ds-bav-consent.jsonA code with no system has no defined meaning. A system should be provided
fsh-generated/resources/Consent-gru-consent.jsonA code with no system has no defined meaning. A system should be provided
fsh-generated/resources/Consent-hmb-irb-npu-consent.jsonA code with no system has no defined meaning. A system should be provided
fsh-generated/resources/Consent-hmb-npu-consent.jsonA code with no system has no defined meaning. A system should be provided
fsh-generated/resources/Observation-anvil-summary-cmg.jsonA code with no system has no defined meaning. A system should be provided
fsh-generated/resources/Observation-anvil-summary-cmg.jsonA code with no system has no defined meaning. A system should be provided
fsh-generated/resources/Observation-anvil-summary-phs000711.jsonA code with no system has no defined meaning. A system should be provided
fsh-generated/resources/Observation-anvil-summary-phs000711.jsonA code with no system has no defined meaning. A system should be provided
fsh-generated/resources/Observation-anvil-summary-phs000711.jsonA code with no system has no defined meaning. A system should be provided
fsh-generated/resources/Observation-anvil-summary-phs000711.jsonA code with no system has no defined meaning. A system should be provided
fsh-generated/resources/Observation-anvil-summary-phs000711.jsonA code with no system has no defined meaning. A system should be provided
fsh-generated/resources/Observation-anvil-summary-phs000711.jsonA code with no system has no defined meaning. A system should be provided
fsh-generated/resources/Observation-anvil-summary-phs000711.jsonA code with no system has no defined meaning. A system should be provided
fsh-generated/resources/ResearchStudy-ncpi-research-study-01.jsonA code with no system has no defined meaning. A system should be provided
fsh-generated/resources/ResearchStudy-research-study-cmg.jsonA code with no system has no defined meaning. A system should be provided
fsh-generated/resources/ResearchStudy-research-study-phs000711.jsonA code with no system has no defined meaning. A system should be provided

TYPE_SPECIFIC_CHECKS_DT_IDENTIFIER_IETF_SYSTEM_VALUE

input/resources/StructureDefinition-research-study-consent.jsonif identifier.system is 'urn:ietf:rfc:3986', then the identifier.value must be a full URI (e.g. start with a scheme), not 'Local eCMS identifier'

Terminology_PassThrough_TX_Message

fsh-generated/resources/ActivityDefinition-example-study-data-dictionary-table-1.jsonNo valid Display Names found for https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/example-study-data-dictionary-dataset-codesystem-1#demographics in the language Demographic data for 'https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/example-study-data-dictionary-dataset-codesystem-1#demographics'
fsh-generated/resources/Condition-disease-example-1.jsonUnknown Code 'NCIT:Neuroblastoma' in the system 'http://purl.obolibrary.org/obo/ncit.owl' - note that the code system is labeled as a fragment, so the code may be valid in some other fragment for 'http://purl.obolibrary.org/obo/ncit.owl#NCIT:Neuroblastoma'
fsh-generated/resources/Observation-anvil-summary-cmg.jsonWrong Display Name 'Variable Summary' for https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/ncpi#Summary - should be 'Summary Data' (for the language(s) 'en') for 'https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/ncpi#Summary'
fsh-generated/resources/Observation-anvil-summary-cmg.jsonWrong Display Name 'Number of Samples' for https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/ncpi#SampleCount - should be 'Number of samples that are part of this study' (for the language(s) 'en') for 'https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/ncpi#SampleCount'
fsh-generated/resources/Observation-anvil-summary-cmg.jsonWrong Display Name 'Number of Participants' for https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/ncpi#Participant - should be 'Number of participants that are part of this study' (for the language(s) 'en') for 'https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/ncpi#Participant'
fsh-generated/resources/Observation-anvil-summary-phs000711.jsonWrong Display Name 'Variable Summary' for https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/ncpi#Summary - should be 'Summary Data' (for the language(s) 'en') for 'https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/ncpi#Summary'
fsh-generated/resources/Observation-anvil-summary-phs000711.jsonWrong Display Name 'Number of Samples' for https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/ncpi#SampleCount - should be 'Number of samples that are part of this study' (for the language(s) 'en') for 'https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/ncpi#SampleCount'
fsh-generated/resources/Observation-anvil-summary-phs000711.jsonWrong Display Name 'Number of Participants' for https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/ncpi#Participant - should be 'Number of participants that are part of this study' (for the language(s) 'en') for 'https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/ncpi#Participant'
fsh-generated/resources/ResearchStudy-cmg-research-study-bhcmg.jsonUnknown Code 'HP:0030853' in the system 'http://purl.obolibrary.org/obo/hp.owl' - note that the code system is labeled as a fragment, so the code may be valid in some other fragment for 'http://purl.obolibrary.org/obo/hp.owl#HP:0030853'
fsh-generated/resources/Specimen-ncpi-research-study-01-specimen-01.jsonUnknown Code 'C17610' in the system 'http://purl.obolibrary.org/obo/ncit.owl' - note that the code system is labeled as a fragment, so the code may be valid in some other fragment for 'http://purl.obolibrary.org/obo/ncit.owl#C17610'

Terminology_TX_System_NotKnown

fsh-generated/resources/ActivityDefinition-example-study-data-dictionary-table-1.jsonCode System URI 'https://uts.nlm.nih.gov/uts/umls' is unknown so the code cannot be validated
fsh-generated/resources/Observation-diagnostic-implication-1.jsonCode System URI 'http://fhir.ncpi-project-forge.io/ValueSet/condition-inheritance-vs' is unknown so the code cannot be validated
fsh-generated/resources/Observation-example-observation-data-row-1.jsonCode System URI 'https://uts.nlm.nih.gov/uts/umls' is unknown so the code cannot be validated
fsh-generated/resources/Observation-example-study-summary-gender.jsonCode System URI 'https://uts.nlm.nih.gov/uts/umls' is unknown so the code cannot be validated
fsh-generated/resources/Observation-example-study-summary-gender.jsonCode System URI 'https://uts.nlm.nih.gov/uts/umls' is unknown so the code cannot be validated
fsh-generated/resources/Observation-example-study-summary-gender.jsonCode System URI 'https://uts.nlm.nih.gov/uts/umls' is unknown so the code cannot be validated
fsh-generated/resources/Observation-variant-example-1.jsonCode System URI 'https://www.ncbi.nlm.nih.gov/gene' is unknown so the code cannot be validated
fsh-generated/resources/Observation-variant-example-1.jsonCode System URI 'http://fhir.ncpi-project-forge.io/ValueSet/loinc-answers' is unknown so the code cannot be validated
fsh-generated/resources/Observation-variant-example-1.jsonCode System URI 'http://www.ncbi.nlm.nih.gov/refseq' is unknown so the code cannot be validated
fsh-generated/resources/QuestionnaireResponse-example-questionnaire-demographics-response-1.jsonCode System URI 'https://uts.nlm.nih.gov/uts/umls' is unknown so the code cannot be validated
fsh-generated/resources/StructureDefinition-study-summary.jsonCode System URI 'https://uts.nlm.nih.gov/uts/umls' is unknown so the code cannot be validated
fsh-generated/resources/StructureDefinition-study-summary.jsonCode System URI 'https://uts.nlm.nih.gov/uts/umls' is unknown so the code cannot be validated
fsh-generated/resources/StructureDefinition-study-variable-summary.jsonCode System URI 'https://uts.nlm.nih.gov/uts/umls' is unknown so the code cannot be validated
fsh-generated/resources/StructureDefinition-study-variable-summary.jsonCode System URI 'https://uts.nlm.nih.gov/uts/umls' is unknown so the code cannot be validated

Type_Specific_Checks_DT_String_WS

fsh-generated/resources/ImplementationGuide-NCPI-FHIR-Implementation-Guide.jsonvalue should not start or finish with whitespace 'Grouping subject participation within a research study is helpful to provide definitive lists of participants that fit a specific criteria such as *All Participants* or *Participants From a Particular Consent Group*, etc. '
fsh-generated/resources/ImplementationGuide-NCPI-FHIR-Implementation-Guide.jsonvalue should not start or finish with whitespace 'A FHIR Document Reference created by an analysis task. Context.related = Task '

VALUESET_SHAREABLE_MISSING

fsh-generated/resources/ValueSet-condition-inheritance-vs.jsonThe ShareableValueSet profile says that the experimental element is mandatory, but it is not present. Published value sets SHOULD conform to the ShareableValueSet profile
fsh-generated/resources/ValueSet-datatable-mappings-valueset-1.jsonThe ShareableValueSet profile says that the experimental element is mandatory, but it is not present. Published value sets SHOULD conform to the ShareableValueSet profile
fsh-generated/resources/ValueSet-datatable-valueset-1.jsonThe ShareableValueSet profile says that the experimental element is mandatory, but it is not present. Published value sets SHOULD conform to the ShareableValueSet profile
fsh-generated/resources/ValueSet-example-study-data-dictionary-case-control-vs-1.jsonThe ShareableValueSet profile says that the experimental element is mandatory, but it is not present. Published value sets SHOULD conform to the ShareableValueSet profile
fsh-generated/resources/ValueSet-ncpi-vs.jsonThe ShareableValueSet profile says that the experimental element is mandatory, but it is not present. Published value sets SHOULD conform to the ShareableValueSet profile
fsh-generated/resources/ValueSet-nih-consent-codes.jsonThe ShareableValueSet profile says that the experimental element is mandatory, but it is not present. Published value sets SHOULD conform to the ShareableValueSet profile